Category:LBS/Biosynthesis/CeramideSyn: Difference between revisions

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|rowspan="4"| Serine palmitoyl transferase (SPT)
|rowspan="5"| Serine palmitoyl transferase (SPT)
| [http://www.uniprot.org/uniprot/O15269 SPTLC1]
| [http://www.uniprot.org/uniprot/O15269 SPTLC1](LCB1)
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| 9q22.31
|rowspan="4"| A heterodimer membrane protein (LC1-LC2 or LC1-LC3) whose catalytic site faces the cytosol. In addition, small subunits (ssSPTa or ssSPTb) are essential for the full enzymatic activity.
|rowspan="5"| A heterodimer membrane protein (LCB1-LCB2 or LCB1-LCB3) whose catalytic site faces the cytosol. In addition, small subunits (SPTSSA or SPTSSB) are essential for the full enzymatic activity. SPTSSA/B has no homology with the Tsc3p subunit in yeast.<ref>Han G., Gupta S.D., Gable K., Niranjanakumari S., Moitra P., Eichler F., Brown R.H. Jr., Harmon J.M., Dunn T.M. (2009) "Identification of small subunits of mammalian serine palmitoyltransferase that confer distinct acyl-CoA substrate specificities" Proc. Natl. Acad. Sci. USA 106:8186-8191 PMID 19416851</ref>
<ul>
<ul>
<li>SPTLC1-SPTLC2-ssSPTa ... C16-CoA
<li>SPTLC1-SPTLC2-SPTSSA ... C16-CoA
<li>SPTLC1-SPTLC3-ssSPTa ... C14- and C16-CoA
<li>SPTLC1-SPTLC3-SPTSSA ... C14- and C16-CoA
<li>SPTLC1-SPTLC2-ssSPTb ... C18-CoA
<li>SPTLC1-SPTLC2-SPTSSB ... C18-CoA
<li>SPTLC1-SPTLC3-ssSPTb ... broad specificity
<li>SPTLC1-SPTLC3-SPTSSB ... broad specificity
</ul>
</ul>
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| [http://www.uniprot.org/uniprot/O15270 SPTLC2]
| [http://www.uniprot.org/uniprot/O15270 SPTLC2]<br/>(LCB2,LCB2A)
|  
| 14q24.3
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| [http://www.uniprot.org/uniprot/Q9NUV7 SPTLC3](LCB2B)
| 20p12.1
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| [http://www.uniprot.org/uniprot/Q9NUV7 SPTLC3]
| [http://www.uniprot.org/uniprot/Q969W0 SPTSSA](ssSPTa)
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| 14q13.1
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|-
| ssSPTa, ssSPTb <br/> (SPTSSa/b)
| [http://www.uniprot.org/uniprot/Q8NFR3 SPTSSB](ssSPTb)
|  
| 3q26.1
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| 3-Ketodihydrosphingosine reductase
|rowspan="1"| 3-Ketodihydrosphingosine reductase
| KDSR / FVT1
| [http://www.uniprot.org/uniprot/Q06136 KDSR](FVT1)
|  
| 18q21.33
|  
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|rowspan="6"| Ceramide synthase
|rowspan="6"| Ceramide synthase <ref>Levy M, Futerman AH (2010) "Mammalian ceramide synthases" IUBMB Life 62(5):347-356 PMID 20222015</ref>
| CerS1<br/>(LAG1 longevity assurance homolog 1)
| [http://www.uniprot.org/uniprot/P27544 CERS1]<br/>(LASS1,LAG1)
| 19q12
| 19p13.11
| Brain, skeletal muscle, testis for C18
| Brain, skeletal muscle, testis for C18
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|-
| [http://www.uniprot.org/uniprot/Q96G23 CerS2]<br/>(Tumor metastasis-suppressor gene 1)
| [http://www.uniprot.org/uniprot/Q96G23 CERS2]<br/>(LASS2,TMSG1)
| 1q21.2
| 1q21.3
| Kidney, liver and other >12 organs for C20-C26
| Kidney, liver and other >12 organs for C20-C26
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| CerS3
| [http://www.uniprot.org/uniprot/Q8IU89 CERS3](LASS3)
| 15q26.3
| 15q26.3
| Skin, testis for C22-C26 α-hydroxy chains
| Skin, testis for C22-C26 α-hydroxy chains
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| CerS4
| [http://www.uniprot.org/uniprot/Q9HA82 CERS4](LASS4)
| 19q13.2
| 19p13.2
| Low in all tissues for C18-C22. Esp. skin, leucocytes, heart, liver.
| Low in all tissues for C18-C22. Esp. skin, leucocytes, heart, liver.
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| CerS5
| [http://www.uniprot.org/uniprot/Q8N5B7 CERS5](LASS5)
| 12q13.3
| 12q13.12
| Low in all tissues for C16. Esp. muscle and brain. Major in lung epithelia.
| Low in all tissues for C16. Esp. muscle and brain. Major in lung epithelia.
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| CerS6
| [http://www.uniprot.org/uniprot/Q6ZMG9 CERS6](LASS6)
| 2q24.3
| 2q24.3
| Low in all tissues for C14-C16
| Low in all tissues for C14-C16
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|rowspan="2"|Dihydroceramide &Delta;4-desaturase  
|rowspan="2"|Dihydroceramide &Delta;4-desaturase  
| DEGS1 (DES1)
| [http://www.uniprot.org/uniprot/O15121 DEGS1](DES1)
| 1q42.11
| 1q42.11
|
|rowspan="2"| The enzyme hydroxylates DES to form phytoceramide.<ref>Michel C, van Echten-Deckert G. (1997) "Conversion of dihydroceramide to ceramide occurs at the cytosolic face of the endoplasmic reticulum" FEBS Lett 416(2):153-155 PMID 9369202</ref>
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| [http://www.uniprot.org/uniprot/Q6QHC5 DEGS2](DES2)
| 14q32.2
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| DEGS2 (DES2)
|colspan="4"|<references/>
|
| The enzyme hydroxylates DES to form phytoceramide.
|}
|}

Latest revision as of 04:30, 18 December 2017

serine
+
palmitoyl (16:0)-CoA

Arrow00r.png
 serine palmitoyl
  transferase
3-ketodihydro-
  sphingosine
(3-KDS)

Arrow00r.png
  3-KDS
  reductase
dihydrosphingosine
(DHS, d18:0)
Cer synthase
Arrow1rr.png
fatty acyl CoA
dihydroceramide
(DHCer)

Arrow00r.png
  DHCer
  desaturase
ceramide
(Cer)
Cytosolic surface of the endoplasmic reticulum (ER)

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