Difference between revisions of "Category:LBS/Search"

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Line 33: Line 33:
 
<table>
 
<table>
 
  <tr>
 
  <tr>
   <td>{{#formtag:select|name="nre" id="nre" |<option value="([]~\()">NR end</option><option value=".*" selected="yes">any</option>}}</td>
+
   <td>{{#formtag:select|name="nre" id="nre" |<option value="([]|\()">NR end</option><option value=".*" selected="yes">any</option>}}</td>
   <td>{{#formtag:select|name="4th" id="4th"|<option value="((Glc)~(Gal)~(Man)~(Ino))[abfp0-9]*-.">Hexose</option><option value="((GlcNAc)~(GalNAc))[abfp0-9]*-.">HexNAc</option><option value="((GlcA)~(GalA))[abfp0-9]*-.">HexA</option><option value="[^-]*Fuc[^-]*-.">Fucose</option><option value="[^-]*NeuAc[^-]*-.">NeuAc</option><option value="[^-]*NeuGc[^-]*-.">NeuGc</option><option value="[^-]*-.">Others</option><option value="" selected="yes">none</option>}}</td>
+
   <td>{{#formtag:select|name="4th" id="4th"|<option value="((Glc)|(Gal)|(Man)|(Ino))[abfp0-9]*-.">Hexose</option><option value="((GlcNAc)|(GalNAc))[abfp0-9]*-.">HexNAc</option><option value="((GlcA)|(GalA))[abfp0-9]*-.">HexA</option><option value="[^-]*Fuc[^-]*-.">Fucose</option><option value="[^-]*NeuAc[^-]*-.">NeuAc</option><option value="[^-]*NeuGc[^-]*-.">NeuGc</option><option value="[^-]*-.">Others</option><option value="" selected="yes">none</option>}}</td>
 
   <td>-</td>
 
   <td>-</td>
   <td>{{#formtag:select|name="3th" id="3th"|<option value="((Glc)~(Gal)~(Man)~(Ino))[abfp0-9]*-.">Hexose</option><option value="((GlcNAc)~(GalNAc))[abfp0-9]*-.">HexNAc</option><option value="((GlcA)~(GalA))[abfp0-9]*-.">HexA</option><option value="[^-]*Fuc[^-]*-.">Fucose</option><option value="[^-]*NeuAc[^-]*-." selected="yes">NeuAc</option><option value="[^-]*NeuGc[^-]*-.">NeuGc</option><option value="[^-]*-.">Others</option><option value="">none</option>}}</td>
+
   <td>{{#formtag:select|name="3th" id="3th"|<option value="((Glc)|(Gal)|(Man)|(Ino))[abfp0-9]*-.">Hexose</option><option value="((GlcNAc)|(GalNAc))[abfp0-9]*-.">HexNAc</option><option value="((GlcA)|(GalA))[abfp0-9]*-.">HexA</option><option value="[^-]*Fuc[^-]*-.">Fucose</option><option value="[^-]*NeuAc[^-]*-." selected="yes">NeuAc</option><option value="[^-]*NeuGc[^-]*-.">NeuGc</option><option value="[^-]*-.">Others</option><option value="">none</option>}}</td>
  
 
   <td>-</td>
 
   <td>-</td>
   <td>{{#formtag:select|name="2nd" id="2nd"|<option value="((Glc)~(Gal)~(Man)~(Ino))[abfp0-9]*-." selected="yes">Hexose</option><option value="((GlcNAc)~(GalNAc))[abfp0-9]*-.">HexNAc</option><option value="((GlcA)~(GalA))[abfp0-9]*-.">HexA</option><option value="[^-]*Fuc[^-]*-.">Fucose</option><option value="[^-]*NeuAc[^-]*-.">NeuAc</option><option value="[^-]*NeuGc[^-]*-.">NeuGc</option><option value="[^-]*-.">Others</option><option value="">none</option>}}</td>
+
   <td>{{#formtag:select|name="2nd" id="2nd"|<option value="((Glc)|(Gal)|(Man)|(Ino))[abfp0-9]*-." selected="yes">Hexose</option><option value="((GlcNAc)|(GalNAc))[abfp0-9]*-.">HexNAc</option><option value="((GlcA)|(GalA))[abfp0-9]*-.">HexA</option><option value="[^-]*Fuc[^-]*-.">Fucose</option><option value="[^-]*NeuAc[^-]*-.">NeuAc</option><option value="[^-]*NeuGc[^-]*-.">NeuGc</option><option value="[^-]*-.">Others</option><option value="">none</option>}}</td>
 
<td>-</td>
 
<td>-</td>
   <td>{{#formtag:select|name="1st" id="1st"|<option value="((Glc)~(Gal)~(Man)~(Ino))[abfp0-9]*-" selected="yes">Hexose</option><option value="((GlcNAc)~(GalNAc))[abfp0-9]*-">HexNAc</option><option value="((GlcA)~(GalA))[abfp0-9]*-">HexA</option><option value="[^-]*Fuc[^-]*-">Fucose</option><option value="[^-]*NeuAc[^-]*-">NeuAc</option><option value="[^-]*NeuGc[^-]*-">NeuGc</option><option value="[^-]*-">Others</option><option value="">none</option>}}</td>
+
   <td>{{#formtag:select|name="1st" id="1st"|<option value="((Glc)|(Gal)|(Man)|(Ino))[abfp0-9]*-" selected="yes">Hexose</option><option value="((GlcNAc)|(GalNAc))[abfp0-9]*-">HexNAc</option><option value="((GlcA)|(GalA))[abfp0-9]*-">HexA</option><option value="[^-]*Fuc[^-]*-">Fucose</option><option value="[^-]*NeuAc[^-]*-">NeuAc</option><option value="[^-]*NeuGc[^-]*-">NeuGc</option><option value="[^-]*-">Others</option><option value="">none</option>}}</td>
 
   <td>-</td>
 
   <td>-</td>
   <td>{{#formtag:select|name="re" id="re" |<option value="((Cer)~(Sph))">Cer/Sph</option><option value=".+">any</option>}}</td>
+
   <td>{{#formtag:select|name="re" id="re" |<option value="((Cer)|(Sph))">Cer/Sph</option><option value=".+">any</option>}}</td>
 
   <td>&nbsp;</td>
 
   <td>&nbsp;</td>
   <td>{{#formtag:input|name="cals" type="button" value="SEARCH" id="mainchain"}}</td>
+
   <td>{{#formtag:input|name="cals" type="button" value="SEARCH" disabled="true" id="mainchain"}}</td>
 +
  <td>{{#persist:ListAllChains|List allchains|ListAllChains|0|dummy|;}}</td>
 
  </tr>
 
  </tr>
 
</table>
 
</table>
 
}}
 
}}
 +
 +
<div id="loading">[[File:loading.gif]] loading...</div>
 +
<div id="PolySeqResult" style="height: 400px; overflow: scroll; display: none"></div>
  
 
{{#formtag:fieldset||
 
{{#formtag:fieldset||

Revision as of 11:26, 19 February 2018

Search from Structure

  • Search from Sphingolipid Major Series
  • Search from Specific Sugars
  • Search from the non-reducing end pattern (click "Show" to expand the table)
  • Search from the polysaccharide sequence
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All Polysaccharide Sequences


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Precursor Mass (polysaccharide part only) → Product Masses (comma separated)    (tolerance )

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