Category:LBS/Search: Difference between revisions

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   <td>{{#formtag:select|name="re" id="re" |<option value="((Cer)|(Sph))">Cer/Sph</option><option value=".+">any</option>}}</td>
   <td>{{#formtag:select|name="re" id="re" |<option value="((Cer)|(Sph))">Cer/Sph</option><option value=".+">any</option>}}</td>
   <td>&nbsp;</td>
   <td>&nbsp;</td>
   <td>{{#formtag:input|name="cals" type="button" value="SEARCH" disabled="true" id="mainchain"}}</td>
   <td>{{#formtag:input|name="cals" type="button" value="SEARCH" disabled="true" id="sequence_search_button"}}</td>
   <td>{{#persist:ListAllChains|List allchains|ListAllChains|0|dummy|;}}</td>
   <td>{{#persist:ListAllChains|List allchains|ListAllChains|0|dummy|;}}</td>
  </tr>
  </tr>
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}}
}}


<div id="loading">[[File:loading.gif]] loading...</div>
<div id="PolySeqResult" style="height: 400px; overflow: scroll; resize: vertical; display: none"></div>
<div id="PolySeqResult" style="height: 400px; overflow: scroll; resize: vertical; display: none"></div>


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{{#formtag:legend||Advanced search}}
{{#formtag:legend||Advanced search}}
{{#formtag:input|type="text" size="60" name="1" id="advanced_polysaccharide_sequence"}}
{{#formtag:input|type="text" size="60" name="1" id="advanced_polysaccharide_sequence"}}
{{#formtag:input|type="button" id="advanced_search_button" value="SEARCH"}}<br />
{{#formtag:input|type="button" disabled="true" id="advanced_search_button" value="SEARCH"}}<br />
{{#formtag:input|type="checkbox" id="advanced_search_nre"}}{{#formtag:label|for="advanced_search_nre"|Non-reducing end}}
{{#formtag:input|type="checkbox" id="advanced_search_nre"}}{{#formtag:label|for="advanced_search_nre"|Non-reducing end}}
}}
}}
<div id="loading">[[File:loading.gif]] loading...</div>
<div id="AdvResult" style="height: 400px; overflow: scroll; display: none"></div>
</ul>
</ul>



Revision as of 05:58, 24 February 2018

{{#includejs:LBSSearch.js}} {{#includejs:GlycosphingolipidMassCalculator.js}} {{#includejs:AdvancedLBSSearch.js}}

Search from Structure


Search From Mass

Glycosphingolipid Mass Calculator for MS Analysis
Exact MassNominal MassFormula
Carbohydrates Hexose
HexNAc
NeuAc
NeuGc
Fucose
HexA
Fatty Acids Carbon No.
Unsaturation
Hydroxy group
Polarity

Long Chain Bases Carbon No.
Unsaturation
Hydroxy group
Adduct Ions Na
K
Ammonium
Modification Sulfate
Phosphate
Methyl
Acetyl
Lactone

Examples

Ganglioside GM1 of FA 18:0, LCB d20:1 (LBSG2005105)
  • Carbohydrates [3 Hexose, 1 HexNAc, 1 NeuAc]
  • Fatty acid [18 carbons, 0 unsaturation, 0 hydroxy group]
  • Long chain base [20 carbons, 1 unsaturation, 2 hydroxy groups]
Sulfatide of FA 24:1, LCB d18:1 (LBSG1001005)
  • Carbohydrates [1 Hexose, 0 HexNAc, 0 NeuAc]
  • Fatty acid [24 carbons, 1 unsaturation, 0 hydroxy group]
  • Long chain base [18 carbons, 1 unsaturation, 2 hydroxy groups]
  • Modification [Sulfate: 1]
Lactotetraosylceramide of FA 16:0, LCB t18:0 (LBSG3B04001)
  • Carbohydrates [3 Hexose, 1 HexNAc, 0 NeuAc]
  • Fatty acid [16 carbons, 0 unsaturation, 1 hydroxy group]
  • Long chain base [18 carbons, 0 unsaturation, 3 hydroxy groups]


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