Editor: Editor moved page PathwayMap:GLtest to PathwayMap:GlycerolipidBiosynthesis

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Jcblmaster at 05:10, 3 February 2023

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Jcblmaster: Jcblmaster moved page PathwayMap:GLtest to PathwayMa:GLtest

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Tipputa at 07:50, 26 April 2018

2018-04-26T07:50:47Z

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Mitsuharu at 07:42, 26 April 2018

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Tipputa at 06:57, 26 April 2018

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Tipputa at 06:23, 26 April 2018

2018-04-26T06:23:22Z

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Tipputa at 06:22, 26 April 2018

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Tipputa: Created page with "{{#includejs:PathwayEditorHandler.js}}
[title] <2.5,2.5> #Glycerolipid Metabolome de novo pathway of glycerophospholipid //Glyc..."

2018-04-15T13:02:38Z

Created page with "{{#includejs:PathwayEditorHandler.js}} <div id="source" style="display:none"> <nowiki> [title] <2.5,2.5> #Glycerolipid Metabolome de novo pathway of glycerophospholipid //Glyc..."

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[title] <2.5,2.5>
#Glycerolipid Metabolome
de novo pathway of glycerophospholipid
//Glycerol-3-phosphate acyltransferase
g[GPAM]
GPAT
<span>
Protein
Glycerol-3-phosphate acyltransferase
<br>
Subcellular location
GPAT1,2:Mitochondrion
GPAT3,4:ER
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:2.3.1.15"KEGG")

UniPlot <a href=http://www.uniprot.org/uniprot/Q9SHJ5>1</a>, <a href=http://www.uniprot.org/uniprot/Q9SHJ5>2</a>, <a href=http://www.uniprot.org/uniprot/Q9SHJ5>3</a>, <a href=http://www.uniprot.org/uniprot/Q9SHJ5>4</a>
</span>

[ERtext] (trans) <45.5,77.5>css(font-size:50px)
Endoplasmic Reticulum

[MTtext] (trans) <54,29.5>css(font-size:50px)
Mitochondrion

[ER] <2,3,350,1352>css(background:rgb(0,200,50 ; color:black; border-:100px; box-shadow:none;z-index:1;)
ER

[ER2] <22,37.5,1000,800>css(background:rgb(0,200,50; box-shadow:none;z-index:0;)

[MT] <25,3,950,540>css(background:rgb(255,200,50 ; border-:100px; box-shadow:none;z-index:1;)

//glycerol-3-phosphate
[G3P] <9,8>
!GL{OH |OH|O-PO_s3s_}
?[link](http://lipidbank.jp/cgi-bin/main.cgi?id=PGP "G3P")
<pop>
//![image](img/G3P.png)
glycerol-3-phosphate
</pop>
d=[GPAM](l_w3)=>u[LPA]

//lysophosphatidic acid
[LPA] <8,21.5>
!GL{O-CO-R1|OH|O-PO_s3s_}
LPA
<pop>
lysophosphatidic acid

</pop>
d=[AGPAT](l_w3)=>u[PA]

//phosphatidic acid
[PA] <8,32>
!GL{O-CO-R1|O-CO-R1|O-PO_s3s_}
?[link](http://jcbl.jp/wiki/Volatile:ListMol?my_1=LBGPA"PA")
d=[LPIN](l_w3)=>u[DAG]
r=[CDS2](l_w3)=>l[CDP-DAG]
r=[CDS1](l_w3)=>[CDP-DAGer]

//diacylglycerol
[DAG] <7.5,58.5>
!GL{O-CO-R1|O-CO-R1| OH}
DAG
=[CHPT1](l_w3)=>[PC]
=[CEPT1SELENOI](l_w3)=>[PE]

//cytidine diphosphate-diacylglycerol
[CDP-DAG] <27.5,26>
!GL{O-CO-R1 | O-CO-R2 | O-PO2-CMP</t>}
CDP-DAG
u=[PGS1](l_w3)=>d[PGP]

//cytidine diphosphate-diacylglycerol
[CDP-DAGer] <28.5,39>
!GL{O-CO-R1 | O-CO-R2 | O-PO2-CMP</t>}
CDP-DAG
r=[CDIPT](l_w3)=>[PI]

//phosphatidylglycerol-phosphate
[PGP] <27.5,9.5>
!PG{O-CO-R1 | O-CO-R2 | O-PO2-O| HO|O3P-O}
PGP
=[PTPMT1] (l_w3)=>[PG]

//phosphatidylglycerol
[PG] <49,9.5>
!PG{O-CO-R1 | O-CO-R2 | PO2-O| HO|HO }
?[link](http://jcbl.jp/wiki/Volatile:ListMol?my_1=LBGPG"PG")
=[CRLS1](l_w3)=>[CL]

//phosphatidylinositol
[PI] <48,38.5>
!GL{O-CO-R1 | O-CO-R2 | O-PO2-Inositol}
?[link](http://jcbl.jp/wiki/Volatile:ListMol?my_1=LBGPI"PI")

//cardiolipin
[CL] <70.5,8>
!CL{O-CO-R1|O-CO-R2|O-PO-O|HO|O-PO-O|O-CO-R3| O-CO-R4}
CL

//phosphatidylcholine
[PC] <26.5,51>
!GL{O-CO-R1|O-CO-R1|O-PO2-Choline}
?[link](http://jcbl.jp/wiki/Volatile:ListMol?my_1=LBGPC"PC")

d=[PTDSS](l_w3)=>u[PS]

//phosphatidylethanolamine
[PE] <25,75>
!GL{O-CO-R1|O-CO-R1| O-PO2-Ethanolamine}
?[link](http://jcbl.jp/wiki/Volatile:ListMol?my_1=LBGPE "PE")
u=[PTDSS]l(l_w3)=>d[PS]

//phosphatidylserine
[PS] (box) <26.5,62.5>
!GL{O-CO-R1|O-CO-R1|O-PO2-Serine}
?[link](http://jcbl.jp/wiki/Volatile:ListMol?my_1=LBGPS "PS")
d=[PISD]r(l_w3)=>u[PE]

//1-acylglycerol-3-phosphate O-acyltransferase
g[AGPAT]
AGPAT

//Phosphatidate cytidylyltransferase
g[CDS2]
CDS2
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:2.7.7.41"KEGG")

//Phosphatidate cytidylyltransferase
g[CDS1]
CDS1
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:2.7.7.41"KEGG")

//CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
g[PGS1]
PGS
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:2.7.8.5 "KEGG")

//Phosphatidylglycerophosphatase
g[PTPMT1]
PTPMT
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:3.1.3.27"KEGG")

//cardiolipin synthase
g[CRLS1]
CRLS
?[link](http://www.uniprot.org/uniprot/Q9UJA2"UniProt")

//Phosphatidate phosphatase
g[LPIN]
LPIN
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:3.1.3.4"KEGG")
<pop>
Phosphatidate phosphatase
</pop>

//Cholinephosphotransferase
g[CHPT1]
CHPT
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:2.7.8.2"KEGG")
?[link](http://www.uniprot.org/uniprot/Q8WUD6"UniProt")

//Ethanolaminephosphotransferase 1
g[CEPT1SELENOI]
CEPT1/SELENOI
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:2.7.8.1"KEGG")

//Phosphatidylserine synthase
g[PTDSS]
PTDSS
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:2.7.8.8"KEGG")

//Phosphatidylserine decarboxylase
g[PISD]
PISD
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:4.1.1.65"KEGG")

//CDP-diacylglycerol--inositol 3-phosphatidyltransferase
g[CDIPT]
CDIPT
?[link](http://www.genome.jp/dbget-bin/www_bget?ec:2.7.8.11"KEGG")

//Inositol
[Inositol] <38,44.5>
Inositol
u==>u[CMP]

//Inositol
[CMP] <45,44.5>
CMP

//CTP
[CTP] <17.5,29>
CTP
d==>d[PPi]

//PPi
[PPi] <22,27>
PPi

//H2O
[H2O] <7,43.5>
H2O
r==>r[Pi]

//Pi
[Pi] <8,50.5>
Pi

//CDP-Ethanolamine
[CDPethanolamine] <8.5,66>
CDP-Ethanolamine
r==>r[CMP2]

//CMP
[CMP2] <14.5,72>
CMP

//CDP-Choline
[CDPcholine] <12.5,55>
CDP-Choline
r==>l[CMP3]

//CMP
[CMP3] <24.5,59.5>
CMP

//Serine
[Serine] <34.5,57.5>
Ser
l==>l[Choline]

//Choline
[Choline] <34.5,60.5>
Choline

//CMP4
[CMP4] <66,16.5>
CMP

//CDP-DAG---CL
[conect1] <59,16.5>
CDP-DAG
d=(l_w3)=r[CDP-DAG]
u=(l_w3)=>u[CMP4]

//H2O2
[H2O2] <40,10.5>
H2O
d==>d[Pi2]

//Pi2
[Pi2] <44.5,10.5>
Pi

//glycerophosphate
[glycerophosphate] <34.5,23.5>
glycerophosphate

l==>[CMP5]

//CMP5
[CMP5] <34.5,20>
CMP

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PathwayMap:GlycerolipidBiosynthesis - Revision history