Lipoquality:Database: Difference between revisions

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Please click the link above to access lipoquality data.
 
Please click [[Lipoquality:Resource|here]] to access the lipoquality data.
 
<h2>Dataset</h2>
;Mouse : C75BL/6J mouse fed with 11F for 2 weeks
; Organs : Aorta (ApoE KO), Brain, Heart, Kidney, Liver, Lung, Macrophage, Muscle, Plasma, Plasma (ApoE KO), Small intestine, Spleen
; Measurement : See [http://metabolonote.kazusa.or.jp/SE110:/MS2 Metabolonote] database.
 
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Revision as of 05:49, 5 March 2018

Lipoquality

Resource

Please click here to access the lipoquality data.

Dataset

Mouse
C75BL/6J mouse fed with 11F for 2 weeks
Organs
Aorta (ApoE KO), Brain, Heart, Kidney, Liver, Lung, Macrophage, Muscle, Plasma, Plasma (ApoE KO), Small intestine, Spleen
Measurement
See Metabolonote database.

Notation

Following lipid categories are considered.

Phosphoglycerolipid symbols
Name Notation
Phosphatidic acid PA
R2-lyso-PA lysoPA
Phosphatidyl-choline PC
R2-lyso-PC lysoPC
R1-ether-PC EtherPC
Phosphatidyl-ethanolamine PE
R2-lyso-PE lysoPE
R1-ether-PE EtherPE
Phosphatidyl-inositol PI
R2-lyso-PI lysoPI
Phosphatidyl-serine PS
R2-lyso-PS lysoPS
Phosphatidyl-glycerol PG
R2-lyso-PG lyzoPG
Bis(monoacylglycero)phosphate BMP
1-Monoacylglycerol-phospho-2,3-diacylglycerol hemiBMP
Cardiolipin CL
Glycerolipid, Plant lipid, and other symbols
Name Notation
Triacylglycerol TG
Diacylglycerol DG
Monoacylglycerol MG
Monogalactosyl-diacylglycerol MGDG
Digalactosyl-diacylglycerol DGDG
Sulfoquinovosyl-diacylglycerol SQDG
Diacylglyceryl-trimethylhomoserine DGTS
Glucuronosyl-diacylglycerol GlcADG
Fatty acid FA
Fatty acid ester of hydroxyl fatty acid FAHFA
Acylcarnitine AC
Sphingomyelin SM
Ceramide symbols[1]
non-hydroxy FA
[N]
α-hydroxy FA
[A]
esterified ω-hydroxy FA
[EO]
dihydrosphingosine
[DS]
Cer[NDS] Cer[ADS] Cer[EODS]
sphingosine
[S]
Cer[NS] Cer[AS] Cer[EOS]
phytosphingosine
[P]
Cer[AP] Cer[NP] Cer[EOP]
6-hydroxy sphingosine
[H]
Cer[NH] Cer[AH] Cer[EOH]

  1. Masukawa Y et al. "Characterization of overall ceramide species in human stratum corneums" J Lipid Res 49:1466-1476, 2008