Category:LBS: Difference between revisions
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==={{Bilingual|利用する略称|Abbreviations}}=== | ==={{Bilingual|利用する略称|Abbreviations}}=== | ||
{| | {| class="collapsible collapsed" | ||
!colspan="3" align="center" style="background:lightgray"| Sugar Abbreviations (Ex. Glc → glucose) | |||
{{#repeatnum:LBS/AbbrevRow|1| | {{#repeatnum:LBS/AbbrevRow|1| | ||
Cer && ceramides && セラミド | Cer && ceramides && セラミド | ||
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NeuAc && ''N''-acetyl-neuraminic acid && ''N''-アセチルノイラミン酸 | NeuAc && ''N''-acetyl-neuraminic acid && ''N''-アセチルノイラミン酸 | ||
NeuGc && ''N''-glycolyl-neuraminic acid && ''N''-グリコリルノイラミン酸 | NeuGc && ''N''-glycolyl-neuraminic acid && ''N''-グリコリルノイラミン酸 | ||
NeuNH && (deacetyl) neuraminic acid (pyruvate + mannosamine) && | NeuNH && (deacetyl) neuraminic acid<br/>(pyruvate + mannosamine) && ノイラミン酸<br/>(ピルビン酸+マンノサミン) | ||
KDN && 2-keto-3-deoxy-D-glycero-D-galacto-nononic acid && KDN | KDN && 2-keto-3-deoxy-D-glycero-<br/>D-galacto-nononic acid && KDN | ||
}} | |||
|- | |||
!colspan="3" align="center" style="background:lightgray"| Modifiers | |||
{{#repeatnum:LBS/AbbrevRow|1| | |||
AEPn && (2-Aminoethyl-)hydroxyphosphoryl && | |||
MAEPn && (''N''-Methyl-2-aminoethyl-)hydroxyphosphoryl && | |||
EtnP && 2-Aminoethanolphospho && | |||
MAEPr && (''N''-Methyl-2-aminoethyl-)phosphoryl && | |||
HPO3 && Phosphono && | |||
HSO3 && Sulfono && | |||
2C=CH && Ethyl && | |||
PC && Phosphocholine && | |||
}} | }} | ||
|} | |} | ||
=={{BilingualID番号 (ページタイトル) の設計 |Design of Sphingolipid Page Titles}}== | |||
<center> | |||
<table border=1> | <table border=1> | ||
<tr> | <tr> | ||
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<td style="background-color:yellowgreen;" width=15px align="center"><big>B</big> | <td style="background-color:yellowgreen;" width=15px align="center"><big>B</big> | ||
<td style="background-color:darkseagreen;" width=15px align="center"><big>S</big> | <td style="background-color:darkseagreen;" width=15px align="center"><big>S</big> | ||
<td style="background-color:Blue; color:white" width=15px align="center"><big>'' | <td style="background-color:Blue; color:white" width=15px align="center"><big>''s1''</big> | ||
<td style="background-color:Blue; color:white" width=15px align="center"><big>'' | <td style="background-color:Blue; color:white" width=15px align="center"><big>''s2''</big> | ||
<td style="background-color: | <td style="background-color:Blue; color:white" width=15px align="center"><big>''s3''</big> | ||
<td style="background-color:tomato; color:white" width=15px align="center"><big>''n1''</big> | |||
<td style="background-color:tomato; color:white" width=15px align="center"><big>'' | <td style="background-color:tomato; color:white" width=15px align="center"><big>''n2''</big> | ||
<td style="background-color: | <td style="background-color:firebrick; color:white" width=15px align="center"><big>''x1''</big> | ||
<td style="background-color:firebrick; color:white" width=15px align="center"><big>'' | <td style="background-color:firebrick; color:white" width=15px align="center"><big>''y1''</big> | ||
<td style="background-color:firebrick; color:white" width=15px align="center"><big>'' | |||
<td style="background-color:white;" width=15px align="center"><big>''c1''</big> | <td style="background-color:white;" width=15px align="center"><big>''c1''</big> | ||
<td style="background-color:white;" width=15px align="center"><big>''c1''</big> | <td style="background-color:white;" width=15px align="center"><big>''c1''</big> | ||
</tr> | </tr> | ||
</table> | </table> | ||
</center> | </center> | ||
{{Twocolumn| | {{Twocolumn| | ||
'''s1 ∼ s3''' ... Structure code | |||
: The first letter '''s1''' is: | |||
:: '''Z''' for Gal<sub>β1-4</sub>Glc<sub>β1-1</sub>Cer root, prevalent in higher animals | |||
:: '''Y''' for GlcNAc<sub>β1-3</sub>Man<sub>β1-4</sub>Glc<sub>β1-1</sub>Cer root (''Arthro'' type) | |||
:: '''0''' to '''Q''' for the 1st sugar as explained below. | |||
: The 2<sup>nd</sup> and 3<sup>rd</sup> letters '''s2''' and '''s3''' are: | |||
:: '''0''' to '''Q''' for the 3<sup>rd</sup> and 4<sup>th</sup> sugars for '''Z''' class | |||
:: '''0''' to '''Q''' for the 4<sup>rd</sup> and 5<sup>th</sup> sugars for '''Y''' class | |||
:: '''0''' to '''Q''' for the 2<sup>rd</sup> and 3<sup>th</sup> sugars for others | |||
| | | | ||
}} | }} | ||
Revision as of 08:57, 3 March 2011
Sphingolipid
Class Overview
Sphingosine & Ceramide
Sphingosine is synthesized from decarboxylating condensation of palmitoyl CoA with serine. It is a 18-carbon amino alcohol (16 carbons from palmitic acid and 2 from serine) with one unsaturated bond (2-amino-4-octadecene-1,3-diol). Sphingosine is further acylated to form ceramide, an important component of cell membranes.
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スフィンゴシンはパルミトイルCoAがアミノ酸セリンと脱炭酸縮合して生成します。炭素を18個含むアミノアルコール(16個がパルミチン酸、2個がセリン由来)で不飽和結合を1つ含んでいます (2-amino-4-octadecene-1,3-diol)。
スフィンゴシンがアシル化したものが、細胞膜の重要な成分であるセラミドです。
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Abbreviations
Template:BilingualID番号 (ページタイトル) の設計
L | B | S | s1 | s2 | s3 | n1 | n2 | x1 | y1 | c1 | c1 |
s1 ∼ s3 ... Structure code
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Classification
By the Number of Sugars 糖の個数
For glycosphingolipid, 2 digits following LBS stand for the number of attached sugars. For phosphosphingolipid, the code of phosphorylation, PP. |
スフィンゴ糖脂質は結合している糖の総数をLBSに続く2桁の数字で、スフィンゴリン脂質は数字の代わりにリン酸化修飾を示す記号PPで分類しています。 |
Sphingolipid Overview | ||
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Polysaccharide Chain
Glycosphingolipids (Abbr. R = Galβ1-4Glcβ1-Cer) | |||||||||||||||||
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Ganglio [Gg] (??) GalNAcβ1-4R |
Lacto [Lc] (??) GlcNAcβ1-3R |
Globo [Gb] (??) Galα1-4R |
Root [R] (??) derivatives of R | ||||||||||||||
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Isoganglio [IG] (??) GalNAcβ1-3R |
Lacto with β1-6 [L6] (??) GlcNAcβ1-6R |
Isoglobo [IB] (??) Galα1-3R | |||||||||||||||
Lactoganglio [LG]
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Isogloboganglio [BG]
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Glycosphingolipids without ROOT | ||||||||||||
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Glc-Cer (??) Glcβ1-Cer |
Gal-Cer (??) Galβ1-Cer | |||||||||||
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Phospho (??) Ino-P-Cer |
Others (??) | |||||||||||
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