Category:LBS/Search: Difference between revisions
mNo edit summary
Line 1: Line 1:
{{#includejs:LBSSearch.js}}
{{#includejs:LBSSearch.js}}
{{#includejs:CalculateMass.js|calculateF2M|calc_formula|calc_mass}}
<!---{{#includejs:CalculateMass.js|calculateF2M|calc_formula|calc_mass}}--->
{{#includejs:GlycosphingolipidMassCalculator.js}}
{{#includejs:GlycosphingolipidMassCalculator.js}}
{{#includejs:AdvancedLBSSearch.js}}
{{#includejs:AdvancedLBSSearch.js}}
Line 10: Line 10:


<li> Search from the non-reducing end pattern (click "Show" to expand the table)
<li> Search from the non-reducing end pattern (click "Show" to expand the table)
<table class="wikitable collapsible collapsed" style="text-align:right; background-color:white; margin-left: 1.5em">
<table class="wikitable collapsible collapsed" style="text-align:right; background-color:white; margin-left: 1.5em">
  <tr><th>Name</th><th width="300px">Structure</th></tr>
  <tr><th>Name</th><th width="300px">Structure</th></tr>
  <tr><td>[[Volatile:ListMol/LBS|1=Structure=GalNAca1-3\(Fuca1-2\)Galb1-3GlcNAcb1-3|Blood group A]]</td><td>{{LBS/FormatSugar|GalNAca1-3(Fuca1-2)Galb1-3GlcNAcb1-3-R}}</td></tr>
  <tr><td>[[Volatile:ListMol/LBS|1=Structure=GalNAca1-3\(Fuca1-2\)Galb1-3GlcNAcb1-3|Blood group A]]</td><td>{{LBS/FormatSugar|GalNAca1-3(Fuca1-2)Galb1-3GlcNAcb1-3-R}}</td></tr>
  <tr><td>[[Volatile:ListMol/LBS|1=Structure=Gala1-3\(Fuca1-2\)Galb1-3GlcNAcb1-3|Blood group B]]</td>  <td>{{LBS/FormatSugar|Gala1-3(Fuca1-2)Galb1-3GlcNAcb1-3-R}}</td></tr>
  <tr><td>[[Volatile:ListMol/LBS|1=Structure=Gala1-3\(Fuca1-2\)Galb1-3GlcNAcb1-3|Blood group B]]</td>  <td>{{LBS/FormatSugar|Gala1-3(Fuca1-2)Galb1-3GlcNAcb1-3-R}}</td></tr>
Line 68: Line 68:
=={{Bilingual|質量から探す|Search From Mass}}==
=={{Bilingual|質量から探す|Search From Mass}}==
<!---
<!---
{{#formtag:input|name="cals" type="button" value="SEARCH" disabled="yes" onclick="calculateF2M()"}}
{| class="wikitable" style="float:right;"
{| class="wikitable" style="float:right;"
|
|
Line 103: Line 105:
GM1, 中性、硫酸基のGalCerなど例をいれておく
GM1, 中性、硫酸基のGalCerなど例をいれておく
--->
--->
{{#formtag:input|name="cals" type="button" value="SEARCH" disabled="yes" onclick="calculateF2M()"}}


{|
{|
|
|
<!-- Glycosphingolipid Mass Calculator -->
<!-- Glycosphingolipid Mass Calculator -->
<table class="wikitable" border=1 cellspacing=0 cellpadding=5 style="font-size: small; ackground-color: white; border-collapse: collapse">
<table class="wikitable" border=1 cellspacing=0 cellpadding=5 style="font-size: small; background-color: white; border-collapse: collapse">
  <tr><th colspan="6" style="text-align: center; font-weight: 600">Glycosphingolipid Mass Calculator for MS Analysis</th></tr>
  <tr><th colspan="6" style="text-align: center; font-weight: 600">Glycosphingolipid Mass Calculator for MS Analysis</th></tr>
  <tr>
  <tr>
Line 169: Line 169:
</table>
</table>


|vertical-align=top|
|valign=top|
<big>Examples</big>
<big>Examples</big>
<table>
<table>
Line 197: Line 197:
|}
|}


 
<!---
{{#formtag:fieldset||
{{#formtag:fieldset||
{{#formtag:legend||Display setting}}
{{#formtag:legend||Display setting}}
Line 209: Line 209:
</table>
</table>
}}
}}
--->

Revision as of 06:58, 23 February 2018

{{#includejs:LBSSearch.js}} {{#includejs:GlycosphingolipidMassCalculator.js}} {{#includejs:AdvancedLBSSearch.js}}

Search from Structure

All Polysaccharide Sequences

{{#persist:ListMainchain|List mainchains|ListMainchain|0|dummy|;}}


Search From Mass

Glycosphingolipid Mass Calculator for MS Analysis
Exact MassNominal MassFormula
Carbohydrates Hexose
 HexNAc
 NeuAc
 NeuGc
Fucose
 HexA
Fatty Acids Carbon No.
 Unsaturation
 Hydroxy group
 Polarity
Long Chain Bases Carbon No.
 Unsaturation
 Hydroxy group
Adduct Ions Na
 K
 Ammonium
Modification Sulfate
 Phosphate
 Methyl
 Acetyl
Lactone

Examples

Ganglioside GM1 of FA 18:0, LCB d20:1 (LBSG2005105)
  • Carbohydrates [3 Hexose, 1 HexNAc, 1 NeuAc]
  • Fatty acid [18 carbons, 0 unsaturation, 0 hydroxy group]
  • Long chain base [20 carbons, 1 unsaturation, 2 hydroxy groups]
Sulfatide of FA 24:1, LCB d18:1 (LBSG1001005)
  • Carbohydrates [1 Hexose, 0 HexNAc, 0 NeuAc]
  • Fatty acid [24 carbons, 1 unsaturation, 0 hydroxy group]
  • Long chain base [18 carbons, 1 unsaturation, 2 hydroxy groups]
  • Modification [Sulfate: 1]
Lactotetraosylceramide of FA 16:0, LCB t18:0 (LBSG3B04001)
  • Carbohydrates [3 Hexose, 1 HexNAc, 0 NeuAc]
  • Fatty acid [16 carbons, 0 unsaturation, 1 hydroxy group]
  • Long chain base [18 carbons, 0 unsaturation, 3 hydroxy groups]


This category currently contains no pages or media.

Retrieved from "http://lipidbank.jp/mediawiki/index.php?title=Category:LBS/Search&oldid=115217"