Lipoquality:Database: Difference between revisions
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; Plant : <i>Arabidopsis thaliana, Oryza sativa, Solanum melongena</i> | ; Plant : <i>Arabidopsis thaliana, Oryza sativa, Solanum melongena</i> | ||
; Algae : <i>Auxenochlorella protothecoides, Chlamydomonas reinhardtii, Chlorella sorokiniana, Chlorella variabilis, Dunaliella salina, Euglena gracilis, Nannochloropsis oculata, Pavlova lutheri, Pleurochrysis carterae</i> | ; Algae : <i>Auxenochlorella protothecoides, Chlamydomonas reinhardtii, Chlorella sorokiniana, Chlorella variabilis, Dunaliella salina, Euglena gracilis, Nannochloropsis oculata, Pavlova lutheri, Pleurochrysis carterae</i> | ||
; Mouse : C75BL/6J mouse fed with fish-less chow for 2 weeks | |||
; Organs : Aorta (ApoE KO), Brain, Heart, Kidney, Liver, Lung, Macrophage, Muscle, Plasma, Plasma (ApoE KO), Small intestine, Spleen | |||
; Measurement : See [http://metabolonote.kazusa.or.jp/Main_Page Metabolonote] (see [http://metabolonote.kazusa.or.jp/SE196:/ SE196], [http://metabolonote.kazusa.or.jp/SE197:/ SE197]) database. | |||
Revision as of 00:42, 22 January 2020
Lipoquality
Lipidomics data resource
Go to LipoQuality resource page for browsing lipidomics data.
- Homo sapiens
- NIST plasma (SRM 1950)
- Mus musculus (background: C57BL/6J; diet: CE2, chows of PUFA-dietary controled studies)
- Adrenal gland, Atrium, Brain, Brown adipose tissue, Cerebellum, Cortex, Epididymis, Eye, Feces, Heart, Kidney, Large intestine, Liver, Lung, Macrophage, Medulla, Pancreas, Plasma, Seminal, Skeletal muscle, Skin, Small intestine, Spleen, Stomach, Testis, Thymus, Tongue, Ventricle, White adipose tissue
- Human cultured cell
- HEK293, HeLa, Jurkat, LNCaP, PC3, TPC-1
- Mouse cultured cell
- 3T3-L1, C2C12
- Plant
- Arabidopsis thaliana, Oryza sativa, Solanum melongena
- Algae
- Auxenochlorella protothecoides, Chlamydomonas reinhardtii, Chlorella sorokiniana, Chlorella variabilis, Dunaliella salina, Euglena gracilis, Nannochloropsis oculata, Pavlova lutheri, Pleurochrysis carterae
- Mouse
- C75BL/6J mouse fed with fish-less chow for 2 weeks
- Organs
- Aorta (ApoE KO), Brain, Heart, Kidney, Liver, Lung, Macrophage, Muscle, Plasma, Plasma (ApoE KO), Small intestine, Spleen
- Measurement
- See Metabolonote (see SE196, SE197) database.
Notation
The style follows the proposal for lipidomics nomenclature (Liebisch G et al. J Lipid Res 2013. PMID 23549332). Please visit the MS-DIAL page for more details.
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- Ceramide symbols[1]
non-hydroxy FA [N] |
α-hydroxy FA [A] |
β-hydroxy FA [B] |
esterified ω-hydroxy FA [EO] | |
---|---|---|---|---|
dihydrosphingosine [DS] |
Cer-NDS | Cer-ADS | Cer-BDS | Cer-EODS |
sphingosine [S] |
Cer-NS | Cer-AS | Cer-BS | Cer-EOS |
phytosphingosine [P] |
Cer-NP | Cer-AP | Cer-BP | Cer-EOP |
6-hydroxy sphingosine [H] |
Cer-NH | Cer-AH | Cer-BH | Cer-EOH |
- ↑ Masukawa Y et al. "Characterization of overall ceramide species in human stratum corneums" J Lipid Res 49:1466-1476, 2008