Category:LBG: Difference between revisions

Revision as of 07:59, 11 December 2008

Glycerolipid (グリセロ脂質)

Upper classes: LB

Class Overview

（英文説明・仮） Complex lipid is the main structural component of biological membrane, is a form of lipid bilayer, and broadly classified into Glycerolipid and Sphingolipid. The Glycerolipid category （LBG） includes Glycerophospholipid and Glyceroglycolipid.

（和文説明・仮）リン酸や糖などを含む脂質は複合脂質と呼ばれ、細胞膜の脂質二重層の主要な構成要素です。複合脂質は、一般的にグリセロールを含む脂質（グリセロ脂質）とスフィンゴイドを含む脂質（スフィンゴ脂質）に大別されます。
グリセロ脂質カテゴリー（LBG）には、グリセロリン脂質 (Glycerophospholipid) 、グリセロ糖脂質 (Glyceroglycolipid) などの、グリセロール骨格を共通構造とする分子が含まれています。

Common Abbreviations よく使う略称

PC	PhosphatidylCholine	ホスファチジルコリン
PS	Phosphatidylserine	ホスファチジルセリン
PI	Phosphatidylinositol	ホスファチジルイノシトール
PE	Phosphatidylethanolamine	ホスファチジルエタノールアミン

Design of Glycerolipid identifiers ID番号の設計

26-DIGIT(6+9+9+2)

L

B

G

n

b1

b2

:

x1

y1

z1

w1

c1

:

x2

y2

z2

w2

c2

n ... code of pola head group(Glycerophospholipid) or number of attached sugars(Glyceroglycolipid)
b1 ... type of binding to Fatty acyl-1(LBF1)
b2 ... type of binding to Fatty acyl-2(LBF2)

x1 ... carbon chain length(LBF1)
y1 ... degree of unsaturation(LBF1)
z1 ... position of n－z (n minus z; also ω－z or omega-z) nomenclature(LBF1)
w1 ... structure type(LBF1)
c1 ... serial number(LBF1)

x2 ... carbon chain length(LBF2)
y2 ... degree of unsaturation(LBF2)
z2 ... position of n－z (n minus z; also ω－z or omega-z) nomenclature(LBF2)
w2 ... structure type(LBF2)
c2 ... serial number(LBF2)

n ... ポーラヘッドグループの記号(Glycerophospholipid) 、もしくは修飾する糖の個数 (Glyceroglycolipid)
b1 ... 脂肪酸1(LBF1)の結合のタイプ
b2 ... 脂肪酸2(LBF2)の結合のタイプ

x1 ... 炭素鎖長(LBF1)
y1 ... 不飽和度(LBF1)
z1 ... n－z (またはω－zやomega-z)　における数(LBF1)
w1 ... 骨格のタイプ(LBF1)
c1 ... 通し番号(LBF1)

x2 ... 炭素鎖長(LBF2)
y2 ... 不飽和度(LBF2)
z2 ... n－z (またはω－zやomega-z)　における数(LBF2)
w2 ... 骨格のタイプ(LBF2)
c2 ... 通し番号(LBF2)

Classification by pola head group or number of sugars ポーラヘッドグループもしくは糖の個数による分類

There are 2 digit of code of pola head group (Glycerophospholipid) or number of attached sugars (Glyceroglycolipid). Phosphatidylinositol is treated as Glycerophospholipid.

Glycerophospholipidに関してはポーラヘッドグループを2桁の記号でGlyceroglycolipidに関しては結合している糖の総数を2桁の数字で、記載してあります。なお、Phosphatidylinositolについては、糖脂質ではありますがGlycerophospholipidとしての扱いとなるため、PIの記号が入ってます。

Table 1. Classification by pola head group or number of sugars
(425 pages)	(51 pages)	(58 pages)	(267 pages)
(58 pages)	(37 pages)	(37 pages)	(18 pages)
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Classification by type of binding to Fatty acyl-1 脂肪酸1の結合のタイプによる分類

Table 2. Classification by type of binding to Fatty acyl-1
(4 pages)	(0 pages)	(72 pages)	(23 pages)	(5 pages)

Classification by type of binding to Fatty acyl-2 脂肪酸2の結合のタイプによる分類

Table 3. Classification by type of binding to Fatty acyl-2
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Subcategories

This category has only the following subcategory.

L

LBGA

@@ Line 128: / Line 128: @@
-==Classification by type of binding to Fatty acyl-1 <small>脂肪酸1(LBF1)の結合のタイプによる分類</small>==
+==Classification by type of binding to Fatty acyl-1 <small>脂肪酸1の結合のタイプによる分類</small>==
 {{Twocolumn|
@@ Line 148: / Line 148: @@
-==Classification by type of binding to Fatty acyl-1 <small>脂肪酸1(LBF1)の結合のタイプによる分類</small>==
+==Classification by type of binding to Fatty acyl-2 <small>脂肪酸2の結合のタイプによる分類</small>==
 {{Twocolumn|
@@ Line 157: / Line 157: @@
 <center>
 {| class="wikitable" border="1" cellpadding="2" cellspacing="1" margin: 1em 1em 1em 1em"
-|+ Table 2. Classification by type of binding to Fatty acyl-1
+|+ Table 3. Classification by type of binding to Fatty acyl-2
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBG..C|C: Acyl group<br>}}<br>[[Image:LBG--C.png|200px]]
-|align="center"| {{MapLink|ListMol|LBG..K|K: Alkyl group<br>}}<br>[[Image:LBG--K.png|200px]]
-|align="center"| {{MapLink|ListMol|LBG..N|N: Alkenyl group<br>}}<br>[[Image:LBG--N.png|200px]]
-|align="center"| {{MapLink|ListMol|LBG..G|G: Glycosyl group<br>}}<br>[[Image:LBG--G.png|200px]]
-|align="center"| {{MapLink|ListMol|LBG..P|P: Phosphoryl group<br>}}<br>[[Image:LBG--P.png|200px]]
-|}
-</center>
-==Classification by Chain Length <small>修飾する糖の個数もしくはポーラヘッドグループによる分類</small>==
-{{Twocolumn|
-Fatty acids are extended by polymerization of malonyl CoA, and have even chain length in general.
-|
-Glyceroglycolipidに関しては結合している糖の総数を2桁の数字で、Glycerophospholipidに関してはポーラヘッドグループを2桁の記号で記載してあります。
-なお、Phosphatidylinositolについては、糖脂質ではありますがGlycerophospholipidとしての扱いとなるため、PIの記号が入ってます。
-}}
-<center>
-{| class="wikitable" border="1" cellpadding="2" cellspacing="1" margin: 1em 1em 1em 1em"
-|+ Table 2. Classification by degree of unsaturation
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF..0|0: 不飽和度0<br>}}<br>[[Image:LBF--0.png|85px]]
-|align="center"| {{MapLink|ListMol|LBF..1|1: 不飽和度1<br>}}<br>[[Image:LBF--1.png|140px]]
-|align="center"| {{MapLink|ListMol|LBF..2|2: 不飽和度2<br>}}<br>[[Image:LBF--2.png|200px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF..3|3: 不飽和度3<br>}}<br>[[Image:LBF--3.png|200px]]
-|align="center"| {{MapLink|ListMol|LBF..4|4: 不飽和度4<br>}}<br>[[Image:LBF--4.png|200px]]
-|align="center"| {{MapLink|ListMol|LBF..5|5: 不飽和度5<br>}}<br>[[Image:LBF--5.png|200px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF..6|6: 不飽和度6<br>}}<br>[[Image:LBF--6.png|200px]]
-|align="center"| {{MapLink|ListMol|LBF..7|7: 不飽和度7<br>}}<br>[[Image:LBF--7.png|180px]]
-|align="center"| {{MapLink|ListMol|LBF..8|8: 不飽和度8<br>}}<br>[[Image:LBF--8.png|280px]]
-|}
-</center>
-==Classification by position of n－z nomenclature <small>二重結合の位置（n－z）による分類</small>==
-{{Twocolumn|
-|
-}}
-<center>
-{| class="wikitable" border="1" cellpadding="2" cellspacing="1" margin: 1em 1em 1em 1em"
-|+ Table 3. Classification by position of n－z nomenclature
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF...00|00: n-0<br>}}<br>[[Image:LBF---00.png|80px]]
-|align="center"| {{MapLink|ListMol|LBF...01|01: n-1<br>}}<br>[[Image:LBF---01.png|100px]]
-|align="center"| {{MapLink|ListMol|LBF...02|02: n-2<br>}}<br>[[Image:LBF---02.png|180px]]
-|align="center"| {{MapLink|ListMol|LBF...03|03: n-3<br>}}<br>[[Image:LBF---03.png|180px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF...04|04: n-4<br>}}<br>[[Image:LBF---04.png|180px]]
-|align="center"| {{MapLink|ListMol|LBF...05|05: n-5<br>}}<br>[[Image:LBF---05.png|180px]]
-|align="center"| {{MapLink|ListMol|LBF...06|06: n-6<br>}}<br>[[Image:LBF---06.png|180px]]
-|align="center"| {{MapLink|ListMol|LBF...07|07: n-7<br>}}<br>[[Image:LBF---07.png|150px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF...08|08: n-8<br>}}<br>[[Image:LBF---08.png|150px]]
-|align="center"| {{MapLink|ListMol|LBF...09|09: n-9<br>}}<br>[[Image:LBF---09.png|150px]]
-|align="center"| {{MapLink|ListMol|LBF...10|10: n-10<br>}}<br>[[Image:LBF---10.png|150px]]
-|align="center"| {{MapLink|ListMol|LBF...11|11: n-11<br>}}<br>[[Image:LBF---11.png|150px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF...12|12: n-12<br>}}<br>[[Image:LBF---12.png|150px]]
-|align="center"| {{MapLink|ListMol|LBF...13|13: n-13<br>}}<br>[[Image:LBF---13.png|150px]]
-|align="center"| {{MapLink|ListMol|LBF...14|14: n-14<br>}}<br>[[Image:LBF---14.png|150px]]
-|align="center"| {{MapLink|ListMol|LBF...15|15: n-15<br>}}<br>[[Image:LBF---15.png|150px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF...16|16: n-16<br>}}<br>[[Image:LBF---16.png|150px]]
-|align="center"| {{MapLink|ListMol|LBF...17|17: n-17<br>}}<br>[[Image:LBF---17.png|150px]]
-|align="center"| {{MapLink|ListMol|LBF...18|18: n-18<br>}}<br>[[Image:LBF---18.png|150px]]
-|align="center"| {{MapLink|ListMol|LBF...22|22: n-22<br>}}<br>[[Image:LBF---22.png|180px]]
-|}
-</center>
-==Classification by Structure <small>骨格による分類</small>==
-{{Twocolumn|
-|
-}}
-<center>
-{| class="wikitable" border="1" cellpadding="2" cellspacing="1" margin: 1em 1em 1em 1em"
-|+ Table 4. Classification by Structure
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF.....SC|SC: straight chain<br>}}<br><br>[[Image:LBF-----SC.png|110px]]
-|align="center"| {{MapLink|ListMol|LBF.....BC|BC: branched chain<br>}}<br>[[Image:LBF-----BC.png|110px]]
-|align="center"| {{MapLink|ListMol|LBF.....HP|HP: hydroperoxy<br>}}<br>[[Image:LBF-----HP.png|130px]]
-|align="center"| {{MapLink|ListMol|LBF.....HO|HO: hydroxy or<br>fatty alcohol<br>}}<br>[[Image:LBF-----HO.png|110px]]
-|align="center"| {{MapLink|ListMol|LBF.....OX|OX: oxo<br>}} <br><br>[[Image:LBF-----OX.png|110px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF.....EO|EO: epoxy<br>}}<br><br>[[Image:LBF-----EO.png|135px]]
-|align="center"| {{MapLink|ListMol|LBF.....MO|MO: methoxy<br>}}<br>[[Image:LBF-----MO.png|120px]]
-|align="center"| {{MapLink|ListMol|LBF.....CA|CA: carboxylic<br>}}<br><br>[[Image:LBF-----CA.png|125px]]
-|align="center"| {{MapLink|ListMol|LBF.....AL|AL: aldehyde<br>}}<br><br>[[Image:LBF-----AL.png|115px]]
-|align="center"| {{MapLink|ListMol|LBF.....KT|KT: ketone<br>}}<br><br>[[Image:LBF-----KT.png|115px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF.....ES|ES: ester<br>}}<br><br>[[Image:LBF-----ES.png|140px]]
-|align="center"| {{MapLink|ListMol|LBF.....ET|ET: ether<br>}}<br><br>[[Image:LBF-----ET.png|120px]]
-|align="center"| {{MapLink|ListMol|LBF.....SF|SF: sulfur<br>containing<br>}}<br>[[Image:LBF-----SF.png|120px]]
-|align="center"| {{MapLink|ListMol|LBF.....PH|PH: phosphate<br>}}<br><br>[[Image:LBF-----PH.png|130px]]
-|align="center"| {{MapLink|ListMol|LBF.....AN|AN: nitrogen containing<br>}}<br>[[Image:LBF-----AN.png|115px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF.....AM|AM: amide<br>}}<br><br>[[Image:LBF-----AM.png|140px]]
-|align="center"| {{MapLink|ListMol|LBF.....OP|OP: 12-oxo<br>-phytodienoic acid <br>}}<br>[[Image:LBF-----OP.png|120px]]
-|align="center"| {{MapLink|ListMol|LBF.....JA|JA: jasmonic<br>acid related<br>}}<br>[[Image:LBF-----JA.png|130px]]
-|align="center"| {{MapLink|ListMol|LBF.....PG|PG: prostaglandin<br>}}<br>[[Image:LBF-----PG.png|140px]]
-|align="center"| {{MapLink|ListMol|LBF.....LT|LT: leucotriene<br>}}<br><br>[[Image:LBF-----LT.png|135px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF.....TX|TX: thromboxane<br>}}<br>[[Image:LBF-----TX.png|140px]]
-|align="center"| {{MapLink|ListMol|LBF.....LX|LX: lipoxin<br>}}<br>[[Image:LBF-----LX.png|130px]]
-|align="center"| {{MapLink|ListMol|LBF.....HX|HX: hepoxilin<br>}}<br>[[Image:LBF-----HX.png|120px]]
-|align="center"| {{MapLink|ListMol|LBF.....LG|LG: levugladin<br>}}<br>[[Image:LBF-----LG.png|140px]]
-|align="center"| {{MapLink|ListMol|LBF.....CV|CV: clavulone<br>}}<br>[[Image:LBF-----CV.png|130px]]
-|- valign="top"
-|align="center"| {{MapLink|ListMol|LBF.....XX|XX: others<br>}}<br>[[Image:LBF-----XX.png|130px]]
-|align="center"|
-|align="center"|
-|align="center"|
-|align="center"|
-|}
-==Classification by Structure <small>骨格による分類</small>==
-{{Twocolumn|
-|
-}}
-{| class="wikitable" border="1" cellpadding="2" cellspacing="1" margin: 1em 1em 1em 1em"
-|+ Table 1. Classification of Glycerolipid [[Image:LBS.png|120px]]
 |- valign="top"
-|align="center"|Glycolipid<br/>(incl. phospho)<br/>[[Volatile:ListMol|LBG##***--|LBG##***--: ]]<br/>？
+|align="center"| {{MapLink|ListMol|LBG...C|C: Acyl group<br>}}<br>[[Image:LBG---C.png|200px]]
-|align="center"|Phospholipid<br/> [[Volatile:ListMol|LBGP****##|LBGP****##:]]<br/>?
+|align="center"| {{MapLink|ListMol|LBG...K|K: Alkyl group<br>}}<br>[[Image:LBG---K.png|200px]]
-|align="center"|Others<br/> [[Volatile:ListMol|LBG*******|LBS*******:]]<br/>?
+|align="center"| {{MapLink|ListMol|LBG...N|N: Alkenyl group<br>}}<br>[[Image:LBG---N.png|200px]]
+|align="center"| {{MapLink|ListMol|LBG...G|G: Glycosyl group<br>}}<br>[[Image:LBG---G.png|200px]]
+|align="center"| {{MapLink|ListMol|LBG...P|P: Phosphoryl group<br>}}<br>[[Image:LBG---P.png|200px]]
 |}
 </center>